Publications

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L-Rhamnose metabolism in Clostridium beijerinckii DSM 6423 M. Diallo, A. D. Simons, H. van der Wal, F. Collas, Bwee Houweling-Tan, S. W. M. Kengen, A. M. López-Contreras American Society for Microbiology, Appl. Environ. Microbiol. doi:10.1128/AEM.02656-18 aem.asm.org
Early-Stage Capital Cost Estimation of Biorefinery Processes: A Comparative Study of Heuristic Techniques Mirela Tsagkari, Jean-Luc Couturier,[ Antonis Kokossis, and Jean-Luc Dubois  August 2016, ChemSusChem, 9, 2284 – 2297 onlinelibrary.wiley.com Cover
Bench scale steam explosion pretreatment of acid impregnated elephant grass biomass and its impacts on biomass composition, structure and hydrolysis Rashmi Kataria, Annemerel Mol, Els Schulten, Anton Happel, Solange I. Mussatto  September 2016, Industrial Crops and Products www.sciencedirect.com  
Economic Risk Assessment of Early Stage Designs for Glycerol Valorization in Biorefinery Concepts Carina L. Gargalo, Peam Cheali, John A. Posada, Krist V. Gernaey and Gürkan Sin May 2016, Industrial & Engineering Chemistry Research pubs.acs.org  
Assessing the environmental sustainability of early stage design for bioprocesses under uncertainties: An analysis of glycerol bioconversion Carina L. Gargalo, Peam Cheali, John A. Posada, Ana Carvalho, Krist V. Gernaey and Gürkan Sin December 2016, Journal of Cleaner Production sciencedirect.com another URL
A framework for techno-economic & environmental sustainability analysis by risk assessment for conceptual process evaluation Carina L Gargalo, Ana Carvalho, Krist V. Gernaey and Gürkan Sin June 2016, Biochemical Engineering Journal sciencedirect.com another URL
Selection of Biorefinery Routes: The Case of Xylitol and its Integration with an Organosolv Process A. D. Mountraki, K R. Koutsospyros, B. Benjelloun Mlayah, A. C. Kokossis October 2017, Waste and Biomass Valorization link.springer.com another URL
Discovering Valorisation Paths in Waste Biorefineries using an Ontology Engineering Approach Foteini Barla, Filopoimin Lykokanellos, Antonis C. Kokossis Proceedings of the 26th European Symposium on Computer Aided Process Engineering - ESCAPE 26, 2016 sciencedirect.com  
A Study on the Endogenous Symbiosis of First and Second Generation Biorefineries: Towards a Systematic Methodology.  G.P. Panayiotou, A.D. Mountraki, A.C. Kokossis 10th Panhellenic Chemical Engineering Scientific Conference, 2015 pdf  
Novelty in reactor design and optimization for biotechnology applications using a systems approach G. P. Panayiotou, A. D. Mountraki, A. C. Kokossis 22nd International Congress of Chemical and Process Engineering CHISA 2016 and the 19th Conference on Process Integration chisa.cz  
Targeting Multi-Phase Chemical Reactor Networks in Biochemical Processes: A Superstructure Approach with a View to Innovation and Novel Development G. P. Panayiotou, A. D. Mountraki, A. C. Kokossis 2016 AIChE Annual Meeting, November 13-18, 2016 aiche.confex.com  
Bio-conversion targeting using a model-based systems approach G. P. Panayiotou, A. C. Kokossis Proceedings of the 27th European Symposium on Computer Aided Process Engineering – ESCAPE 27, 2017 sciencedirect.com  
On a systems approach to support novelty in bioreactor design G. P. Panayiotou, A. D. Mountraki, A. C. Kokossis Proceedings of the 26th European Symposium on Computer Aided Process Engineering – ESCAPE 26, 2016 sciencedirect.com  
Semantically-enabled repositories in multi-disciplinary domains: The case of biorefineries Siougkrou E., Lykokanellos F., Barla F. and Kokossis A.C.  Computers and Chemical Engineering, 2018 sciencedirect.com  
Semantically-enabled CAPS platform: Towards a generic and dynamic formulation for the synthesis and optimisation of value chains Siougkrou E., Barla F. and Kokossis A.C.  Computer-Aided Chemical Engineering, 2018    
Development of semantically-enabled community hubs in biorefineries and biorenewables Siougkrou E. and Kokossis A.C.  Computer-Aided Chemical Engineering, 2016 sciencedirect.com  
Early-stage decision making approach for the selection of optimally integrated biorefinery processes Ayse Dilan Celebi, Adriano Viana Ensinas, Shivom Sharma, François Maréchal Journal Energy, Volume 137, October 2017, Elevier sciencedirect.com  
Biobased Supply Chain Optimisation Model under Uncertainties A. Panteli, S.Giarola and N. Shah Computer Aided Chemical Engineering, January 2017, Elsevier researchgate.net  
Lignocellulosic supply chain MILP model: a Hungarian case study A. Panteli, S.Giarola and N. Shah Computer Aided Chemical Engineering, December 2016, Elsevier researchgate.net  
A generic MILP modelling framework for the systematic design of lignocellulosic biorefining supply chains A. Panteli, S.Giarola and N. Shah Industrial & Engineering Chemical Research, May 2018 pubs.acs.org  
Technology superstructure models for decision making in biorefineries  A. Panteli, S.Giarola and N. Shah 12th International Symposium on Process Systems Engineering / 25th European Symposium on Computer Aided Process Engineering (PSE 2015/ESCAPE 25) scholar.google.co.uk  
An optimisation model for supporting investment decisions in biorefineries: a European case study A. Panteli, S.Giarola and N. Shah International Energy Workshop, June 2015 scholar.google.co.uk  
Supply chain optimization tools for the strategic planning of biorefining systems A. Panteli, S.Giarola and N. Shah 2015 AIChE  Annual Meeting scholar.google.co.uk  
Optimal design and planning of glycerol-based biorefinery supply chains under uncertainty Loureiro da Costa Lira Gargalo, C., Carvalho, A., Gernaey, K. V., & Sin, G. Industrial & Engineering Chemistry Research, 2017 pubs.acs.org  
Supply Chain Optimization of Integrated Glycerol Biorefinery: GlyThink Model Development and Application Loureiro da Costa Lira Gargalo, C., Carvalho, A., Gernaey, K., & Sin, G. Industrial & Engineering Chemistry Research, 2017 pubs.acs.org  
Process synthesis, design and analysis using a process-group contribution method Kumar Tula, A., Eden, M. R., & Gani, R. Computers and Chemical Engineering, 2015 sciencedirect.com  
Torrefaction of Biomass Pellets: Modelling of the Process in a Fixed Bed Reactor Ekaterina Artiukhina, Panagiotis Grammelis International Journal of Chemical Molecular, Nuclear Materials and Metallurgical  Engineering, 2015 waset.org  
Torrefaction is a Promising Technology of Poultry (chicken) Litter Conversion into a Solid Fuel Ekaterina Artiukhina, Panagiotis Grammelis, Vladimir Kosov, Vladimir Sinelschikov, Dmitry Klimov International Journal of Energy and Environment, 2016 naun.org  
Torrefaction of Biofuel Pellets: Does the Geometry Matter? Ekaterina Artiokhina, Panagiotis Grammelis 10th Conference on Sustainable Development of Energy, Water and Environment Systems, 2015 doiserbia.nb.rs  
Integration of CAPE Models and Data for the Domain of Biorefining: InterCAPEmodel Ontology Design Linsey Koo, Nikolaos Trokanas, Anna Panteli, Edlira Kalemi, Nilay Shah, Madeleine Bussemaker, Franjo Cecelja Computer Aided Chemical Engineering, Volume 40, 2017, Pages 2341-2346 sciencedirect.com  
A semantic framework for enabling model integration for biorefining Koo, L., N. Trokanas and F. Cecelja Computers & Chemical Engineering, 2017, Elsevier repository.cam.ac.uk  
A Holistic Approach to Model Discovery Using A Domain Ontology Koo, L., N. Trokanas, H. Tokos and F. Cecelja Computers & Chemical Engineering, 2016, Elsevier sciencedirect.com  
Model Integration Using Ontology Input-Output Matching Koo, L. and F. Cecelja Computers & Chemical Engineering, 2015, Elsevier sciencedirect.com  
A Semantic Repository for Model Integration in Biorefining Kalemi, E., Koo, L., & Cecelja, F. Computer Aided Chemical Engineering, 2017, Elsevier sciencedirect.com  
Biorefinery of the green seaweed Ulva lactuca to produce chemicals, biofuels and animal feed Paul Bikker, Marinus M. van Krimpen,Bwee Houweling-Tan,Wouter J.J. Huijgen,Nazareno Scaccia,Piet van Wikselaar,Jaap W. van Hal,Ana M. López-Contreras Journal of Applied Phycology, 2016 link.springer.com  
Simultaneous Optimization of solvent water, and energy consumption: The case of Simultaneous Optimization of solvent water, and energy consumption: The case of CIMV organosolv Mountraki A.D., Benjelloun- MlayahB., Kokossis A.C. GPE –6th International Congress on GreenProcess Engineering, 2018 pdf  
Investment Decision Strategy for Sustainable Biorefineries Mountraki A.D., Benjelloun- Mlayah B., Kokossis A.C. 11th Panhellenic Chemical Engineering Scientific Conference (11PESXM), 2017 pdf  
Simulation of integrated 1G bio-ethanol production and 2G multi-product biorefinery Mountraki A.D., Benjelloun- Mlayah B., Kokossis A.C. 10th Panhellenic Chemical Engineering Scientific Conference, 2015 pdf  
LCIA framework and cross-cutting issues guidance within the UNEP-SETAC Life Cycle Initiative Francesca Veronesa, Jane Bare, Cécile Bulle, Rolf Frischknecht, .., Xun Liao, et al.  Journal of Cleaner Production, 2017 sciencedirect.com  
Heuristics for capital cost estimation: a case study on biorefinery processes M. Tsagkari, J.-L. Couturier, A. Kokossis and J.-L. Dubois 10th Panhellenic Scientific Conference in Chemical Engineering, Patra, Greece, 2015 researchgate.net